Computational bioengineering

Close-up of abdominal aorta

Tissue mechanics, aneurysms, and pain

The Barocas research group explores the relationship between tissue architecture and mechanics using multiscale computational models and mechanical experiments. Currently, they’re researching how aneurysms grow and fail, and how spinal load leads to injury or pain.

Biomedical scan to understand cell behavior

How cellular functions go awry

The Odde Lab aims to understand basic cellular functions in the context of diseases such as brain cancer and Alzheimer's. The team develops physics-based models that predict cell behavior, then use computer simulation and live cell imaging to identify potential therapeutic strategies.

Computer-generated graphic of colored strips at the molecular level; conveys movement

Discovering treatments at the molecular scale

The Sachs Lab is trying to explain how molecules malfunction in diseases like arthritis and Parkinson’s, to discover new treatment strategies. To do this, the team combines experimental biophysics, cell biology, and computational modeling using some of the world’s fastest supercomputers.  

cellular biology

Understanding protein networks

The Sarkar laboratory uses approaches from biomolecular engineering and biology to better understand how protein networks drive health-related processes at the cellular level. Ultimately, this could lead to more effective therapeutics, such as to stop the proliferation of cancer.

arrhythmia in the heart as viewed through electrical activity

Prediction and prevention of cardiac arrhythmias

Alena Talkachova’s group visualizes electrical activity in the heart and small patches of cardiac tissue. They use nonlinear dynamics approaches to predict transition from normal to abnormal cardiac rhythms, and to prevent arrhythmias in the heart. They also develop novel tools to guide mapping-specific ablation in patients with atrial fibrillation.

Hand holding a white engineered heart valve. Person is wearing pink surgical gloves.

Living valves for growing bodies

Bob Tranquillo’s laboratory develops biologically engineered “off-the-shelf” vascular grafts, heart valves, and vein valves. They’ve shown the material, produced by skin cells, has the capacity to grow, which may transform the way pediatric congenital heart defects are treated.

Silhouette of pregnant woman

Pregnancy and soft tissue biomechanics

Kyoko Yoshida's lab studies how soft tissues grow and remodel to support a healthy pregnancy. They combine experimental and computational methods to uncover how mechanical and hormonal changes interact to drive dramatic tissue changes during pregnancy. 

Research from our graduate faculty

Breast cancer cells expressing a tumor suppressor protein

Understanding cell signaling networks

The Batchelor lab combines computational and experimental approaches to understand the regulation and function of cell signaling pathways related to cancer development and progression. The group develops methods to manipulate cell signaling events to restore proper functions in pathological conditions.

Rendering showing cognition

Neural foundations of complex cognition

Jan Zimmermann’s lab explores the neural foundation of decision-making. The interdisciplinary team uses approaches from neuroscience, economics, psychology, math and physics to figure out how organisms adaptively use their finite neural coding capacity to make choices.